chr13:49047527:G>A Detail (hg19) (RB1)

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Summary
Information
Links
Disease area statistics
MGeND
ClinVar
CIViC
DisGeNET
Annotation
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Information

Genome

Assembly	Position
hg19	chr13:49,047,527-49,047,527
hg38	chr13:48,473,391-48,473,391 View the variant detail on this assembly version.

HGVS

RB1

Type	Transcript	Protein
RefSeq	NM_000321.2:c.2520+1G>A
Ensemble	ENST00000267163.6:c.2520+1G>A
	ENST00000650461.1:c.2520+1G>A
	ENST00000713856.1:c.2520+1G>A
	ENST00000713857.1:c.2367+1G>A
	ENST00000713858.1:c.2415+1G>A

Summary

MGeND

Clinical significance	not provided
Variant entry	4
GWAS entry
Disease area statistics	Show details

Frequency

[No Data.]

Prediction

ClinVar

Clinical Significance	Pathogenic
Review star
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Links

RB1

Type	Database	ID	Link
Gene	MIM	614041	OMIM
	HGNC	9884	HGNC
	Ensembl	ENSG00000139687	Ensembl
	NCBI		NCBI
	Gene Cards		Gene Cards
	OncoKB		OncoKB

Type	Database	ID	Link
Variant	TogoVar
	COSMIC	COSM13739	COSMIC
	MONDO

Disease area statistics

MGeND

Clinical significance	Last evaluated	Condition	Origin	Submission ID	Submitter	Institute	Citation	Comment	Image
not provided		malignant neoplasm of rectosigmoid junction	not provided	MGS000042 (TMGS000093)	Hitoshi Nakagama	National Cancer Center Japan
not provided		fundus of stomach	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
not provided		malignant neoplasm of rectosigmoid junction	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan
not provided		ill-defined sites within the digestive system	not provided	MGS000041 (TMGS000094)	Hitoshi Nakagama	National Cancer Center Japan

ClinVar

Clinical significance	Last evaluated	Review status	Condition	Origin	Links
Pathogenic	2024-05-20	criteria provided, multiple submitters, no conflicts	retinoblastoma	germline	Detail

CIViC

[No Data.]

DisGeNET

Score	Disease name	Description	Source	Pubmed	Links
0.500	retinoblastoma	NA	CLINVAR		Detail

Annotation

Annotations

Descrption	Source	Links
NM_000321.3(RB1):c.2520+1G>A AND Retinoblastoma	ClinVar	Detail
NA	DisGeNET	Detail

Overlapped Transcript

Gene	Transcript ID	Chromosome	Start	Stop	Links

Gene: -
dbSNP: rs587778850 dbSNP
Genome: hg19
Position: chr13:49,047,527-49,047,527
Variant Type: snv
Reference Allele: G
Alternative Allele: A

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